BICOB-2024: Keyword Index

Keyword	Papers
a
alignment	SSA: a novel method for Single-cell and Spatial transcriptomics Alignment
alpha-helices interaction	TMHC-MSAT: Accurate Prediction of Inter-Helical Residue Contacts in Transmembrane Proteins Using MSA Transformer
Attention-Deficit/Hyperactivity Disorder (ADHD)	Machine Learning-Based Automated Detection of ADHD Using Heart Rate Variability Data
b
biological relationship inference	Fast Dual-Regularized Autoencoder for Sparse Biological Data
c
Chemical Master Equation	Case-Studies of Parameter Estimation in the Stochastic Reaction-Diffusion Master Equation
contact map	TMHC-MSAT: Accurate Prediction of Inter-Helical Residue Contacts in Transmembrane Proteins Using MSA Transformer
Continual Learning	Generalized Deep Learning Models for COVID-19 Detection with Transfer and Continual Learning
Convolutional Neural Networks (CNN)	AI-Driven Diagnostics in Ophthalmology: Tailored Deep Learning Models for Diabetic Retinopathy with XAI Insights
COVID-19	COVID-19 Epidemic Model Including Unreported Cases and Environmental Fluctuations
COVID-19 detection	Generalized Deep Learning Models for COVID-19 Detection with Transfer and Continual Learning
d
deep learning	Generalized Deep Learning Models for COVID-19 Detection with Transfer and Continual Learning AI-Driven Diagnostics in Ophthalmology: Tailored Deep Learning Models for Diabetic Retinopathy with XAI Insights
Diabetic Retinopathy	AI-Driven Diagnostics in Ophthalmology: Tailored Deep Learning Models for Diabetic Retinopathy with XAI Insights
Disease clustering	Disease Clustering with Process Annotations from Gene Ontology
Disease process annotation	Disease Clustering with Process Annotations from Gene Ontology
drug repurposing	Fast Dual-Regularized Autoencoder for Sparse Biological Data
drug-target interactions	Fast Dual-Regularized Autoencoder for Sparse Biological Data
e
ecosystem	A simulation study on the sustainability of an ecosystem
Environmental Fluctuations	COVID-19 Epidemic Model Including Unreported Cases and Environmental Fluctuations
epidemic model	COVID-19 Epidemic Model Including Unreported Cases and Environmental Fluctuations
Explainable AI (XAI)	AI-Driven Diagnostics in Ophthalmology: Tailored Deep Learning Models for Diabetic Retinopathy with XAI Insights
f
finite state projection	Case-Studies of Parameter Estimation in the Stochastic Reaction-Diffusion Master Equation
food chain	A simulation study on the sustainability of an ecosystem
Fundus Imaging	AI-Driven Diagnostics in Ophthalmology: Tailored Deep Learning Models for Diabetic Retinopathy with XAI Insights
g
Grad-CAM	AI-Driven Diagnostics in Ophthalmology: Tailored Deep Learning Models for Diabetic Retinopathy with XAI Insights
Grad-CAM++	AI-Driven Diagnostics in Ophthalmology: Tailored Deep Learning Models for Diabetic Retinopathy with XAI Insights
h
Health Informatics	TRAPS - A Visual Analytics System for Public Health Surveillance
Health Information System	TRAPS - A Visual Analytics System for Public Health Surveillance
heart rate variability	Machine Learning-Based Automated Detection of ADHD Using Heart Rate Variability Data
human disease analysis	Disease Clustering with Process Annotations from Gene Ontology
m
machine learning	Machine Learning-Based Automated Detection of ADHD Using Heart Rate Variability Data
p
parameter estimation	Case-Studies of Parameter Estimation in the Stochastic Reaction-Diffusion Master Equation
population dynamics	A simulation study on the sustainability of an ecosystem
Predator and prey	A simulation study on the sustainability of an ecosystem
Preventive Health	TRAPS - A Visual Analytics System for Public Health Surveillance
program evaluation	TRAPS - A Visual Analytics System for Public Health Surveillance
protein 3D structure	TMHC-MSAT: Accurate Prediction of Inter-Helical Residue Contacts in Transmembrane Proteins Using MSA Transformer
public health	TRAPS - A Visual Analytics System for Public Health Surveillance
public health surveillance	TRAPS - A Visual Analytics System for Public Health Surveillance
r
reaction-diffusion master equation	Case-Studies of Parameter Estimation in the Stochastic Reaction-Diffusion Master Equation
Recommender Systems	Fast Dual-Regularized Autoencoder for Sparse Biological Data
residue-residue interaction	TMHC-MSAT: Accurate Prediction of Inter-Helical Residue Contacts in Transmembrane Proteins Using MSA Transformer
s
scRNA-seq	SSA: a novel method for Single-cell and Spatial transcriptomics Alignment
sequencing	SSA: a novel method for Single-cell and Spatial transcriptomics Alignment
simulation	A simulation study on the sustainability of an ecosystem
sparse matrix completion	Fast Dual-Regularized Autoencoder for Sparse Biological Data
spatial transcriptomics	SSA: a novel method for Single-cell and Spatial transcriptomics Alignment
stochastic biochemical models	Case-Studies of Parameter Estimation in the Stochastic Reaction-Diffusion Master Equation
stochastic noise	COVID-19 Epidemic Model Including Unreported Cases and Environmental Fluctuations
t
TMHC-MSAT	TMHC-MSAT: Accurate Prediction of Inter-Helical Residue Contacts in Transmembrane Proteins Using MSA Transformer
Tobacco Cessation Programs	TRAPS - A Visual Analytics System for Public Health Surveillance
tobacco control	TRAPS - A Visual Analytics System for Public Health Surveillance
Tobacco Surveillance	TRAPS - A Visual Analytics System for Public Health Surveillance
Transfer Learning	Generalized Deep Learning Models for COVID-19 Detection with Transfer and Continual Learning
transmembrane proteins	TMHC-MSAT: Accurate Prediction of Inter-Helical Residue Contacts in Transmembrane Proteins Using MSA Transformer
u
Unreported Cases	COVID-19 Epidemic Model Including Unreported Cases and Environmental Fluctuations
v
visual analytics	TRAPS - A Visual Analytics System for Public Health Surveillance